Renamed Java packages to match our contiki-os.org domain. Note that this commit does not affect external dependencies

like /tools/mspsim.

This is a very simple modification that affects a very large number of files in Contiki: Cooja,
/platform/cooja, Collect-view, Coffe-manager, and Cooja simulation files (.csc).

I've gone through Contiki to update all references I could find. Nevertheless, this commit will likely
break external dependencies, like saved Cooja simulation files.

examples/udp-stream/udp-stream.csc

@@ -9,7 +9,7 @@
     <randomseed>123456</randomseed>
     <motedelay_us>1000000</motedelay_us>
     <radiomedium>
-      se.sics.cooja.radiomediums.UDGM
+      org.contikios.cooja.radiomediums.UDGM
       <transmitting_range>50.0</transmitting_range>
       <interference_range>100.0</interference_range>
       <success_ratio_tx>1.0</success_ratio_tx>
@@ -19,38 +19,38 @@
       <logoutput>40000</logoutput>
     </events>
     <motetype>
-      se.sics.cooja.mspmote.SkyMoteType
+      org.contikios.cooja.mspmote.SkyMoteType
       <identifier>mote</identifier>
       <description>mote</description>
       <source EXPORT="discard">[CONTIKI_DIR]/examples/udp-stream/udp-stream.c</source>
       <commands EXPORT="discard">make udp-stream.sky TARGET=sky</commands>
       <firmware EXPORT="copy">[CONTIKI_DIR]/examples/udp-stream/udp-stream.sky</firmware>
-      <moteinterface>se.sics.cooja.interfaces.Position</moteinterface>
-      <moteinterface>se.sics.cooja.interfaces.RimeAddress</moteinterface>
-      <moteinterface>se.sics.cooja.interfaces.IPAddress</moteinterface>
-      <moteinterface>se.sics.cooja.interfaces.Mote2MoteRelations</moteinterface>
-      <moteinterface>se.sics.cooja.interfaces.MoteAttributes</moteinterface>
-      <moteinterface>se.sics.cooja.mspmote.interfaces.MspClock</moteinterface>
-      <moteinterface>se.sics.cooja.mspmote.interfaces.MspMoteID</moteinterface>
-      <moteinterface>se.sics.cooja.mspmote.interfaces.SkyButton</moteinterface>
-      <moteinterface>se.sics.cooja.mspmote.interfaces.SkyFlash</moteinterface>
-      <moteinterface>se.sics.cooja.mspmote.interfaces.SkyCoffeeFilesystem</moteinterface>
-      <moteinterface>se.sics.cooja.mspmote.interfaces.SkyByteRadio</moteinterface>
-      <moteinterface>se.sics.cooja.mspmote.interfaces.MspSerial</moteinterface>
-      <moteinterface>se.sics.cooja.mspmote.interfaces.SkyLED</moteinterface>
-      <moteinterface>se.sics.cooja.mspmote.interfaces.MspDebugOutput</moteinterface>
-      <moteinterface>se.sics.cooja.mspmote.interfaces.SkyTemperature</moteinterface>
+      <moteinterface>org.contikios.cooja.interfaces.Position</moteinterface>
+      <moteinterface>org.contikios.cooja.interfaces.RimeAddress</moteinterface>
+      <moteinterface>org.contikios.cooja.interfaces.IPAddress</moteinterface>
+      <moteinterface>org.contikios.cooja.interfaces.Mote2MoteRelations</moteinterface>
+      <moteinterface>org.contikios.cooja.interfaces.MoteAttributes</moteinterface>
+      <moteinterface>org.contikios.cooja.mspmote.interfaces.MspClock</moteinterface>
+      <moteinterface>org.contikios.cooja.mspmote.interfaces.MspMoteID</moteinterface>
+      <moteinterface>org.contikios.cooja.mspmote.interfaces.SkyButton</moteinterface>
+      <moteinterface>org.contikios.cooja.mspmote.interfaces.SkyFlash</moteinterface>
+      <moteinterface>org.contikios.cooja.mspmote.interfaces.SkyCoffeeFilesystem</moteinterface>
+      <moteinterface>org.contikios.cooja.mspmote.interfaces.SkyByteRadio</moteinterface>
+      <moteinterface>org.contikios.cooja.mspmote.interfaces.MspSerial</moteinterface>
+      <moteinterface>org.contikios.cooja.mspmote.interfaces.SkyLED</moteinterface>
+      <moteinterface>org.contikios.cooja.mspmote.interfaces.MspDebugOutput</moteinterface>
+      <moteinterface>org.contikios.cooja.mspmote.interfaces.SkyTemperature</moteinterface>
     </motetype>
     <mote>
       <breakpoints />
       <interface_config>
-        se.sics.cooja.interfaces.Position
+        org.contikios.cooja.interfaces.Position
         <x>33.260163187353555</x>
         <y>30.643217359962595</y>
         <z>0.0</z>
       </interface_config>
       <interface_config>
-        se.sics.cooja.mspmote.interfaces.MspMoteID
+        org.contikios.cooja.mspmote.interfaces.MspMoteID
         <id>1</id>
       </interface_config>
       <motetype_identifier>mote</motetype_identifier>
@@ -58,13 +58,13 @@
     <mote>
       <breakpoints />
       <interface_config>
-        se.sics.cooja.interfaces.Position
+        org.contikios.cooja.interfaces.Position
         <x>70.87477363740156</x>
         <y>31.656474063135494</y>
         <z>0.0</z>
       </interface_config>
       <interface_config>
-        se.sics.cooja.mspmote.interfaces.MspMoteID
+        org.contikios.cooja.mspmote.interfaces.MspMoteID
         <id>2</id>
       </interface_config>
       <motetype_identifier>mote</motetype_identifier>
@@ -72,13 +72,13 @@
     <mote>
       <breakpoints />
       <interface_config>
-        se.sics.cooja.interfaces.Position
+        org.contikios.cooja.interfaces.Position
         <x>112.33402646502834</x>
         <y>47.18506616257089</y>
         <z>0.0</z>
       </interface_config>
       <interface_config>
-        se.sics.cooja.mspmote.interfaces.MspMoteID
+        org.contikios.cooja.mspmote.interfaces.MspMoteID
         <id>3</id>
       </interface_config>
       <motetype_identifier>mote</motetype_identifier>
@@ -86,13 +86,13 @@
     <mote>
       <breakpoints />
       <interface_config>
-        se.sics.cooja.interfaces.Position
+        org.contikios.cooja.interfaces.Position
         <x>132.53950850661624</x>
         <y>78.99637996219282</y>
         <z>0.0</z>
       </interface_config>
       <interface_config>
-        se.sics.cooja.mspmote.interfaces.MspMoteID
+        org.contikios.cooja.mspmote.interfaces.MspMoteID
         <id>4</id>
       </interface_config>
       <motetype_identifier>mote</motetype_identifier>
@@ -100,20 +100,20 @@
     <mote>
       <breakpoints />
       <interface_config>
-        se.sics.cooja.interfaces.Position
+        org.contikios.cooja.interfaces.Position
         <x>136.72844990548202</x>
         <y>114.94735349716447</y>
         <z>0.0</z>
       </interface_config>
       <interface_config>
-        se.sics.cooja.mspmote.interfaces.MspMoteID
+        org.contikios.cooja.mspmote.interfaces.MspMoteID
         <id>5</id>
       </interface_config>
       <motetype_identifier>mote</motetype_identifier>
     </mote>
   </simulation>
   <plugin>
-    se.sics.cooja.plugins.SimControl
+    org.contikios.cooja.plugins.SimControl
     <width>259</width>
     <z>4</z>
     <height>178</height>
@@ -121,12 +121,12 @@
     <location_y>0</location_y>
   </plugin>
   <plugin>
-    se.sics.cooja.plugins.Visualizer
+    org.contikios.cooja.plugins.Visualizer
     <plugin_config>
-      <skin>se.sics.cooja.plugins.skins.IDVisualizerSkin</skin>
-      <skin>se.sics.cooja.plugins.skins.UDGMVisualizerSkin</skin>
-      <skin>se.sics.cooja.plugins.skins.MoteTypeVisualizerSkin</skin>
-      <skin>se.sics.cooja.plugins.skins.AttributeVisualizerSkin</skin>
+      <skin>org.contikios.cooja.plugins.skins.IDVisualizerSkin</skin>
+      <skin>org.contikios.cooja.plugins.skins.UDGMVisualizerSkin</skin>
+      <skin>org.contikios.cooja.plugins.skins.MoteTypeVisualizerSkin</skin>
+      <skin>org.contikios.cooja.plugins.skins.AttributeVisualizerSkin</skin>
       <viewport>1.2465387687077096 0.0 0.0 1.2465387687077096 22.99764760264848 12.704392736072247</viewport>
     </plugin_config>
     <width>257</width>
@@ -136,7 +136,7 @@
     <location_y>180</location_y>
   </plugin>
   <plugin>
-    se.sics.cooja.plugins.LogListener
+    org.contikios.cooja.plugins.LogListener
     <plugin_config>
       <filter />
       <coloring />
@@ -148,7 +148,7 @@
     <location_y>-2</location_y>
   </plugin>
   <plugin>
-    se.sics.cooja.plugins.RadioLogger
+    org.contikios.cooja.plugins.RadioLogger
     <plugin_config>
       <split>449</split>
       <analyzers name="6lowpan" />
@@ -160,7 +160,7 @@
     <location_y>0</location_y>
   </plugin>
   <plugin>
-    se.sics.cooja.plugins.TimeLine
+    org.contikios.cooja.plugins.TimeLine
     <plugin_config>
       <mote>0</mote>
       <mote>1</mote>